exRNAdisease

Entry Detail

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General Information

Database ID: exR0755316 RNA Name: ABHD5 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 43690108 End Site(bp): 43734371 External Links: ENSG00000011198

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand KIAA1143 chr3 44737661 44761619 - RPLP1 chr15 69452814 69456205 + LGALS3BP chr17 78971238 78979947 - ATF7IP chr12 14365632 14502935 + TOMM22 chr22 38681957 38685421 + TIAF1 chr17 29073521 29078857 - TMSB4X chrX 12975110 12977227 + NIPSNAP1 chr22 29554808 29581327 - DCAF10 chr9 37800554 37867666 + ZFAT chr8 134477788 134713049 - THOC5 chr22 29505879 29555216 - CNN2 chr19 1026586 1039068 + GALNT2 chr1 230057990 230282122 + MYO18A chr17 29071124 29180412 - PLBD2 chr12 113358566 113391629 + HS3ST3B1 chr17 14301081 14349404 + TUBB4B chr9 137241287 137243707 + RPL18A chr19 17859910 17864153 + TUBB chr6 30720352 30725426 + AC010422.3 chr19 12643831 12648397 - CBSL chr21 6444869 6468040 - ATP5MC3 chr2 175176258 175184607 - CBS chr21 43053191 43076943 - ANO10 chr3 43354859 43691594 - ZNF75D chrX 135248920 135344109 - SEH1L chr18 12947133 12987536 + DICER1 chr14 95086228 95158010 - GDI1 chrX 154436913 154443467 + PTMA chr2 231706895 231713541 + HSD17B4 chr5 119452473 119637199 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand U73166.1 chr3 50260303 50263358 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.