exRNAdisease

Entry Detail

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General Information

Database ID: exR0756737 RNA Name: CCT7 RNA Type: mRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 73233420 End Site(bp): 73253021 External Links: ENSG00000135624

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand A1BG chr19 58345178 58353492 - ABHD16A chr6 31686955 31703356 - AC004832.3 chr22 30409255 30428990 + AC010422.3 chr19 12643831 12648397 - AC010463.1 chr19 17267418 17282966 + AC011511.4 chr19 10315471 10320678 - AC091167.2 chr15 90249556 90272208 + AC092143.1 chr16 89919165 89936092 + ACIN1 chr14 23058564 23095614 - ACO1 chr9 32384603 32454769 + ACOT7 chr1 6264269 6394391 - ACTA2 chr10 88935074 88991339 - ACTG1 chr17 81509971 81523847 - ACTN4 chr19 38647649 38731589 + ADA2 chr22 17178790 17258235 - ADAMTS7 chr15 78759206 78811464 - ADGRL1 chr19 14147743 14206187 - ADI1 chr2 3497366 3519531 - ADNP chr20 50888916 50931437 - AFMID chr17 78187317 78207701 + AGTRAP chr1 11736084 11754802 + AHCY chr20 34280268 34311802 - AIF1 chr6 31615217 31617021 + AIF1L chr9 131096476 131123152 + AL136454.1 chr1 192716132 192716653 + ALDH7A1 chr5 126531200 126595362 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-3654 chr7 133034860 133034878 - hsa-miR-4426 chr1 192716333 192716349 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC012313.3 chr19 58346854 58362751 - AC093904.4 chr2 9106593 9109865 + AC133644.3 chr2 87455476 87767359 + AC245014.3 chr1 145281116 145281462 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.