exRNAdisease

Entry Detail

---



General Information

Database ID: exR0758745 RNA Name: GABARAP RNA Type: mRNA Chromosome: chr17 Starnd: - Coordinate: Start Site(bp): 7240008 End Site(bp): 7242449 External Links: ENSG00000170296

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007906.2 chr16 53035690 53052873 - AC015813.2 chr17 57989038 58007246 - AC027796.3 chr17 3585149 3636249 - AC040162.1 chr16 67929614 67936017 - AC120057.2 chr17 7240427 7244635 - AC138811.2 chr16 18788063 18801519 - ACAA2 chr18 49782164 49813953 - ACPP chr3 132317369 132368298 + ACSL5 chr10 112374018 112428380 + ACTB chr7 5527148 5563784 - ACTR1A chr10 102461881 102502712 - ACTR2 chr2 65227753 65271253 + ADORA2A chr22 24417879 24442357 + ADRM1 chr20 62302093 62308862 + AHCY chr20 34280268 34311802 - AKAP17A chrX 1591604 1602520 + AKAP8L chr19 15380050 15419141 - AL136295.1 chr14 24189157 24213473 - ALDH18A1 chr10 95605941 95656711 - ALDH7A1 chr5 126531200 126595362 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC132217.1 chr11 2129121 2129964 - AL096870.2 chr14 24209646 24215987 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.