exRNAdisease

Entry Detail

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General Information

Database ID: exR0760869 RNA Name: MT-ND1 RNA Type: mRNA Chromosome: chrMT Starnd: + Coordinate: Start Site(bp): 3307 End Site(bp): 4262 External Links: ENSG00000198888

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD12 chr20 25294742 25390835 - ABLIM1 chr10 114431113 114768061 - AC008575.1 chr5 112827213 112867582 + AC048338.1 chr12 122207779 122266423 - AC068946.2 chr2 219209772 219222738 - AC092718.3 chr16 81053587 81096296 - AC092718.8 chr16 81022316 81096284 - ACAD10 chr12 111686056 111757107 + ACTL6A chr3 179562886 179588407 + ACTR1A chr10 102461881 102502712 - ADAM11 chr17 44758988 44781846 + ADGRV1 chr5 90529344 91164437 + ADORA2A chr22 24417879 24442357 + AGPAT1 chr6 32168212 32178096 - AHCY chr20 34280268 34311802 - AL133352.1 chr10 100505628 100529881 - AL355987.3 chr9 136791379 136800595 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC002550.2 chr16 19694035 19694428 - AC007952.4 chr17 19112000 19112636 - AC008969.1 chr19 58002061 58011232 + AC016876.2 chr17 7581964 7584086 - AC023509.1 chr12 53441741 53467528 + AC027307.2 chr19 1457670 1458580 - AC090152.1 chr8 59119040 59123478 + AC245014.3 chr1 145281116 145281462 + AD000090.1 chr19 35557956 35581954 + AL035425.4 chrX 108719949 108724944 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.