exRNAdisease

Entry Detail

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General Information

Database ID: exR0760870 RNA Name: MT-ND2 RNA Type: mRNA Chromosome: chrMT Starnd: + Coordinate: Start Site(bp): 4470 End Site(bp): 5511 External Links: ENSG00000198763

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAMP chr2 218264123 218270257 - AARS2 chr6 44298731 44313347 - AATF chr17 36948954 37056871 + AC002996.1 chr12 111753890 111791418 + AC005943.1 chr19 1578339 1605445 - AC008695.1 chr5 131425891 131796983 - AC008878.3 chr19 7382834 7470241 + AC026464.4 chr16 69299682 69322700 + AC099811.2 chr17 42119674 42154916 - ACAD9 chr3 128879596 128916067 + ACTG1 chr17 81509971 81523847 - ACTR2 chr2 65227753 65271253 + ADAMTS3 chr4 72280969 72569221 - ADD1 chr4 2843857 2930076 + ADNP2 chr18 80109262 80147523 + AFAP1 chr4 7758714 7939926 - AHCY chr20 34280268 34311802 - AHI1 chr6 135283532 135497765 - AIF1L chr9 131096476 131123152 + AKR1A1 chr1 45550543 45570049 + AL138752.2 chr9 37588413 38068687 - ALDH18A1 chr10 95605941 95656711 - ALDH2 chr12 111766887 111817532 + ALDH7A1 chr5 126531200 126595362 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004812.2 chr12 120116907 120119000 + AC005726.2 chr17 28633206 28635950 + AC007952.4 chr17 19112000 19112636 - AC009446.1 chr8 71675300 71702786 + AC009902.2 chr8 81279871 81281446 - AC021078.1 chr5 149494314 149504670 - AC097478.1 chr4 89743792 89744305 + AC124045.1 chr3 44667412 44669364 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.