exRNAdisease

Entry Detail

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General Information

Database ID: exR0760871 RNA Name: MT-ND3 RNA Type: mRNA Chromosome: chrMT Starnd: + Coordinate: Start Site(bp): 10059 End Site(bp): 10404 External Links: ENSG00000198840

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC1 chr16 15949577 16143074 + AC005832.4 chr12 4604944 4662643 + AC008758.5 chr19 12391949 12441082 - AC012254.2 chr18 47108188 47176345 - AC018523.2 chr11 14493783 14520344 - AC073508.2 chr17 40627356 40665141 - AC092143.1 chr16 89919165 89936092 + AC093155.3 chr1 86993009 87169204 + AC245033.1 chr15 82536788 82573194 - ACAA2 chr18 49782164 49813953 - ACAP2 chr3 195274745 195443044 - ACTR1A chr10 102461881 102502712 - ACTR2 chr2 65227753 65271253 + ADNP chr20 50888916 50931437 - ADPRHL2 chr1 36088892 36093932 + ADRM1 chr20 62302093 62308862 + AHCY chr20 34280268 34311802 - AHCYL1 chr1 109984765 110023742 + AIF1L chr9 131096476 131123152 + AIMP1 chr4 106315544 106349456 + AK2 chr1 33007940 33080996 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016747.4 chr2 61115787 61164825 + AC016876.2 chr17 7581964 7584086 - AC022819.1 chr15 99157231 99161140 - AC245014.3 chr1 145281116 145281462 + AC245033.4 chr15 82533175 82540008 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.