exRNAdisease

Entry Detail

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General Information

Database ID: exR0763119 RNA Name: RPL15 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 23916545 End Site(bp): 23924374 External Links: ENSG00000174748

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ADPRHL2 chr1 36088892 36093932 + AIF1L chr9 131096476 131123152 + AK2 chr1 33007940 33080996 - AAGAB chr15 67200667 67255195 - AC026464.4 chr16 69299682 69322700 + AL513165.2 chr9 37512547 37592469 - ALDOA chr16 30064164 30070457 + AKR1A1 chr1 45550543 45570049 + ABHD14B chr3 51968510 51983409 - ACO1 chr9 32384603 32454769 + ACBD3 chr1 226144679 226186741 - AKAP11 chr13 42272152 42323261 + AC245033.1 chr15 82536788 82573194 - ACTB chr7 5527148 5563784 - ADH5 chr4 99070978 99088801 - ACADM chr1 75724347 75787575 + ACTR1B chr2 97655939 97664044 - AK4 chr1 65147549 65232145 + AC010422.3 chr19 12643831 12648397 - ADRM1 chr20 62302093 62308862 + ALAS1 chr3 52198086 52214327 + AL358113.1 chr9 69035747 69255187 + AL022238.4 chr22 40346529 40410054 + AHCY chr20 34280268 34311802 - AL713999.1 chr1 155169409 155187272 - AC008982.1 chr19 38817471 38840178 - ACTG2 chr2 73892314 73919865 + AC005258.1 chr19 2269525 2341172 + ADSL chr22 40346500 40390463 + ALDH9A1 chr1 165662216 165698863 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC010642.2 chr19 58309727 58327248 - AC012531.1 chr12 54019910 54022589 + AC016876.2 chr17 7581964 7584086 - AC020978.7 chr16 68224713 68227734 + AC023509.1 chr12 53441741 53467528 + AC024075.2 chr19 16633797 16635269 - AC093001.1 chr3 149284782 149333653 + AC245014.3 chr1 145281116 145281462 + AC246817.2 chr8 2648075 2728577 - AD000090.1 chr19 35557956 35581954 + AL022311.1 chr22 37876148 37895563 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.