exRNAdisease

Entry Detail

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General Information

Database ID: exR0763181 RNA Name: RPS18 RNA Type: mRNA Chromosome: chr6 Starnd: + Coordinate: Start Site(bp): 33272075 End Site(bp): 33276511 External Links: ENSG00000231500

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AHCY chr20 34280268 34311802 - AKIRIN1 chr1 38991276 39006059 + AC015802.6 chr17 76563710 76570544 - AC024592.3 chr19 5866171 5903787 - ABRACL chr6 139028745 139043302 + ABTB2 chr11 34150987 34358010 - ADGRL2 chr1 81306160 81992436 + AIFM1 chrX 130129362 130165887 - ALDOA chr16 30064164 30070457 + AKR1A1 chr1 45550543 45570049 + AC005258.1 chr19 2269525 2341172 + AFG3L2 chr18 12328944 12377227 - ABCB7 chrX 75051048 75156732 - AGO2 chr8 140520156 140635633 - AASDH chr4 56338287 56387508 - AKT1S1 chr19 49869033 49878459 - AC011462.1 chr19 41350853 41425001 + ACTB chr7 5527148 5563784 - AEBP2 chr12 19404045 19720801 + ACTR3 chr2 113890063 113962596 + AAR2 chr20 36236459 36270918 + AC008982.1 chr19 38817471 38840178 - ACAA2 chr18 49782164 49813953 - AC007040.2 chr2 70939318 70995336 - ADRA2A chr10 111077029 111080907 + AC011005.1 chr7 129126518 129130793 + AC023055.1 chr12 55757275 55827546 - ACTR2 chr2 65227753 65271253 + AC010422.3 chr19 12643831 12648397 - AC073508.2 chr17 40627356 40665141 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004080.6 chr7 27128969 27152561 - AC004687.1 chr17 58330884 58332508 - AC021078.1 chr5 149494314 149504670 - AC040162.3 chr16 67882461 67886367 + AC091564.7 chr11 6610883 6616594 - AC105339.2 chr15 82752884 82757208 + AC138089.1 chr1 248484245 248485484 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.