Entry Detail



General Information

Database ID:exR0766218
RNA Name:AC016831.1
RNA Type:lncRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):130876809End Site(bp):130913310
External Links:ENSG00000226380



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE69732
Description:Circulating RNAs profile in non-small cell lung cancer patients
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:Non-Small Cell Lung Cancer
Case Sample:Non-Small Cell Lung Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MIB1
chr18
21704957
21870957
+
MTRNR2L1
chr17
22523111
22524663
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-141-3p
chr12
6964155
6964176
+
hsa-miR-200a-3p
chr1
1167916
1167937
+
hsa-miR-522-3p
chr19
53751264
53751285
+
hsa-miR-493-3p
chr14
100869116
100869137
+
hsa-miR-296-3p
chr20
58817626
58817647
-
hsa-miR-224-3p
chrX
151958584
151958606
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
BX284668.2
chr1
16870945
16883659
+
LINC-PINT
chr7
130938963
131110176
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:26417025
Title:Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison.
Author:Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC.
Journal:Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30.
Description:Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.