Entry Detail



General Information

Database ID:exR0766226
RNA Name:AC074183.1
RNA Type:lncRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):84939349End Site(bp):84940245
External Links:ENSG00000232019



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE69732
Description:Circulating RNAs profile in non-small cell lung cancer patients
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:Non-Small Cell Lung Cancer
Case Sample:Non-Small Cell Lung Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABR
chr17
1003518
1229738
-
BAZ1B
chr7
73440406
73522293
-
BCAT2
chr19
48795062
48811029
-
CCDC106
chr19
55641062
55653161
+
EDEM3
chr1
184690237
184754907
-
FKBP8
chr19
18531751
18544077
-
GAPDH
chr12
6534512
6538374
+
GRK6
chr5
177403204
177442901
+
HOXA1
chr7
27093313
27095996
-
MID1IP1
chrX
38801432
38806537
+
NSL1
chr1
212726153
212791782
-
PDCD6
chr5
271621
314974
+
PGK1
chrX
77910739
78129295
+
PIAS1
chr15
68054179
68198603
+
PPDPF
chr20
63520765
63522206
+
RPL27A
chr11
8682788
8714759
+
TPST2
chr22
26521996
26596717
-
UNC119
chr17
28546708
28552631
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC116407.1
chr17
32141226
32143135
-
SNHG7
chr9
136721366
136728184
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:26417025
Title:Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison.
Author:Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC.
Journal:Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30.
Description:Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.