exRNAdisease

Entry Detail

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General Information

Database ID: exR0766244 RNA Name: AC234582.1 RNA Type: lncRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 155195004 End Site(bp): 155205495 External Links: ENSG00000231064

Disease Information

Disease Name: Lung Cancer Disease Category: Cancers MeSH ID: D008175 Type: Neoplasms/Respiratory Tract Neoplasms Alias: Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung

Expression Detail

GEO ID: GSE69732 Description: Circulating RNAs profile in non-small cell lung cancer patients Experimental Design: Cancer vs Control Case Disease Type: Lung Cancer Case Disease SubType: Non-Small Cell Lung Cancer Case Sample: Non-Small Cell Lung Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand DALRD3 chr3 49015488 49022293 - DDIT4 chr10 72273924 72276036 + POLR2F chr22 37952607 38041915 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-130a-3p chr11 57641252 57641273 + hsa-miR-141-3p chr12 6964155 6964176 + hsa-miR-200a-3p chr1 1167916 1167937 + hsa-miR-301a-3p chr17 59151149 59151171 - hsa-miR-130b-3p chr22 21653354 21653375 + hsa-miR-324-3p chr17 7223308 7223330 - hsa-miR-625-5p chr14 65471116 65471136 + hsa-miR-663a chr20 26208243 26208264 - hsa-miR-454-3p chr17 59137787 59137809 - hsa-miR-665 chr14 100875075 100875094 + hsa-miR-301b-3p chr22 21653025 21653047 + hsa-miR-1247-5p chr14 101560362 101560383 - hsa-miR-1908-5p chr11 61815209 61815229 - hsa-miR-1913 chr6 166509364 166509385 - hsa-miR-3150a-3p chr8 95072962 95072983 + hsa-miR-4295 chr10 112634180 112634197 + hsa-miR-3666 chr7 114653373 114653393 + hsa-miR-4731-5p chr17 15251666 15251687 - hsa-miR-6763-5p chr12 132582002 132582020 + hsa-miR-6787-5p chr17 82236673 82236694 + circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26417025 Title: Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison. Author: Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC. Journal: Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30. Description: Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.