exRNAdisease

Entry Detail

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General Information

Database ID: exR0766344 RNA Name: CYTOR RNA Type: lncRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 87454781 End Site(bp): 87636740 External Links: ENSG00000222041

Disease Information

Disease Name: Lung Cancer Disease Category: Cancers MeSH ID: D008175 Type: Neoplasms/Respiratory Tract Neoplasms Alias: Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung

Expression Detail

GEO ID: GSE69732 Description: Circulating RNAs profile in non-small cell lung cancer patients Experimental Design: Cancer vs Control Case Disease Type: Lung Cancer Case Disease SubType: Non-Small Cell Lung Cancer Case Sample: Non-Small Cell Lung Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ADGRG2 chrX 18989307 19122637 - AHCY chr20 34280268 34311802 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-105-5p chrX 152394458 152394480 - hsa-miR-128-3p chr2 135665446 135665466 + hsa-miR-193a-3p chr17 31560050 31560071 + hsa-miR-376c-3p chr14 101039732 101039752 + hsa-miR-193b-3p chr16 14304017 14304038 + hsa-miR-513a-5p chrX 147213538 147213555 - hsa-miR-3681-3p chr2 12199174 12199195 + hsa-miR-642b-3p chr19 45674941 45674962 - hsa-miR-2467-3p chr2 239351732 239351753 - hsa-miR-642a-3p chr19 45674978 45674999 + hsa-miR-873-3p chr9 28888889 28888910 - hsa-miR-216a-3p chr2 55988981 55989002 - hsa-miR-7853-5p chr6 6169380 6169400 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC017002.1 chr2 111607841 111612518 + AC133644.3 chr2 87455476 87767359 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26417025 Title: Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison. Author: Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC. Journal: Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30. Description: Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.