exRNAdisease

Entry Detail

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General Information

Database ID: exR0766386 RNA Name: H19 RNA Type: lncRNA Chromosome: chr11 Starnd: - Coordinate: Start Site(bp): 1995176 End Site(bp): 2001470 External Links: ENSG00000130600

Disease Information

Disease Name: Lung Cancer Disease Category: Cancers MeSH ID: D008175 Type: Neoplasms/Respiratory Tract Neoplasms Alias: Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung

Expression Detail

GEO ID: GSE69732 Description: Circulating RNAs profile in non-small cell lung cancer patients Experimental Design: Cancer vs Control Case Disease Type: Lung Cancer Case Disease SubType: Non-Small Cell Lung Cancer Case Sample: Non-Small Cell Lung Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-519c-3p chr19 53686522 53686543 + hsa-miR-20a-5p chr13 91351072 91351094 + hsa-miR-148a-3p chr7 25949922 25949943 - hsa-miR-130b-3p chr22 21653354 21653375 + hsa-miR-20b-5p chrX 134169850 134169872 - hsa-miR-4701-5p chr12 48772014 48772035 - hsa-miR-4761-5p chr22 19963755 19963775 + hsa-miR-3194-5p chr20 51452948 51452968 - hsa-miR-625-5p chr14 65471116 65471136 + hsa-miR-93-5p chr7 100093815 100093837 - hsa-miR-140-5p chr16 69933103 69933124 + hsa-miR-585-3p chr5 169263616 169263634 - hsa-miR-6893-3p chr8 144435551 144435572 - hsa-miR-671-5p chr7 151238449 151238471 + hsa-miR-301a-3p chr17 59151149 59151171 - hsa-miR-6512-3p chr2 177313811 177313832 - hsa-miR-941 chr20 63919551 63919573 + hsa-miR-152-3p chr17 48037174 48037194 - hsa-miR-519b-3p chr19 53695263 53695284 + hsa-miR-588 chr6 126484646 126484666 + hsa-miR-130a-3p chr11 57641252 57641273 + hsa-miR-6720-5p chr6 1390359 1390381 - hsa-miR-29a-3p chr7 130876748 130876769 - hsa-miR-194-5p chr11 64891404 64891425 - hsa-miR-106a-5p chrX 134170244 134170266 - hsa-miR-3605-3p chr1 33332405 33332427 - hsa-miR-4295 chr10 112634180 112634197 + hsa-miR-106b-5p chr7 100094043 100094063 - hsa-miR-29c-3p chr1 207801865 207801886 - hsa-miR-346 chr10 86264747 86264769 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26417025 Title: Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison. Author: Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC. Journal: Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30. Description: Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.