Entry Detail



General Information

Database ID:exR0766544
RNA Name:MIR4435-2HG
RNA Type:lncRNA
Chromosome:chr2
Starnd:-
Coordinate:
Start Site(bp):111006015End Site(bp):111523376
External Links:ENSG00000172965



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE69732
Description:Circulating RNAs profile in non-small cell lung cancer patients
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:Non-Small Cell Lung Cancer
Case Sample:Non-Small Cell Lung Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-105-5p
chrX
152394458
152394480
-
hsa-miR-1-3p
chr18
21829015
21829036
-
hsa-miR-128-3p
chr2
135665446
135665466
+
hsa-miR-136-5p
chr14
100884716
100884738
+
hsa-miR-193a-3p
chr17
31560050
31560071
+
hsa-miR-206
chr6
52144401
52144422
+
hsa-miR-193b-3p
chr16
14304017
14304038
+
hsa-miR-503-5p
chrX
134546371
134546393
-
hsa-miR-513a-5p
chrX
147213538
147213555
-
hsa-miR-873-5p
chr9
28888925
28888945
-
hsa-miR-3611
chr10
35079609
35079629
-
hsa-miR-3681-3p
chr2
12199174
12199195
+
hsa-miR-4525
chr17
82668281
82668301
-
hsa-miR-2467-3p
chr2
239351732
239351753
-
hsa-miR-5010-5p
chr17
42514208
42514229
+
hsa-miR-873-3p
chr9
28888889
28888910
-
hsa-miR-216a-3p
chr2
55988981
55989002
-
hsa-miR-7853-5p
chr6
6169380
6169400
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC017002.1
chr2
111607841
111612518
+
AC133644.3
chr2
87455476
87767359
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:26417025
Title:Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison.
Author:Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC.
Journal:Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30.
Description:Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.