exRNAdisease

Entry Detail

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General Information

Database ID: exR0766549 RNA Name: MIRLET7BHG RNA Type: lncRNA Chromosome: chr22 Starnd: + Coordinate: Start Site(bp): 46053869 End Site(bp): 46113928 External Links: ENSG00000197182

Disease Information

Disease Name: Lung Cancer Disease Category: Cancers MeSH ID: D008175 Type: Neoplasms/Respiratory Tract Neoplasms Alias: Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung

Expression Detail

GEO ID: GSE69732 Description: Circulating RNAs profile in non-small cell lung cancer patients Experimental Design: Cancer vs Control Case Disease Type: Lung Cancer Case Disease SubType: Non-Small Cell Lung Cancer Case Sample: Non-Small Cell Lung Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AGRN chr1 1020120 1056118 + ADAT3 chr19 1905399 1913447 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-98-5p chrX 53556299 53556320 - hsa-miR-520a-5p chr19 53690895 53690915 + hsa-miR-508-3p chrX 147236945 147236967 - hsa-let-7b-5p chr22 46113691 46113712 + hsa-miR-766-5p chrX 119646799 119646820 - hsa-miR-1306-5p chr22 20086072 20086093 + hsa-miR-4500 chr13 87618671 87618687 - hsa-let-7a-5p chr9 94175962 94175983 + hsa-miR-29c-3p chr1 207801865 207801886 - hsa-miR-2116-3p chr15 59171192 59171212 - hsa-miR-6783-3p chr17 44934618 44934639 - hsa-miR-3126-5p chr2 69103691 69103712 + hsa-miR-3180 chr16 15154949 15154967 - hsa-miR-874-3p chr5 137647582 137647603 - hsa-miR-34b-5p chr11 111512950 111512972 + hsa-miR-29b-3p chr7 130877467 130877489 - hsa-let-7f-5p chrX 53557246 53557267 - hsa-let-7d-5p chr9 94178841 94178862 + hsa-miR-183-5p chr7 129774967 129774988 - hsa-miR-1343-3p chr11 34941888 34941909 + hsa-miR-345-3p chr14 100307912 100307933 + hsa-let-7g-5p chr3 52268336 52268357 - hsa-miR-449c-5p chr5 55172313 55172337 - hsa-miR-330-5p chr19 45639049 45639070 - hsa-miR-2682-5p chr1 98045307 98045329 - hsa-miR-3064-5p chr17 64500817 64500837 - hsa-miR-2114-5p chrX 150228016 150228037 + hsa-miR-29a-3p chr7 130876748 130876769 - hsa-miR-605-3p chr10 51299623 51299644 + hsa-miR-132-5p chr17 2049965 2049986 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26417025 Title: Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison. Author: Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC. Journal: Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30. Description: Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.