exRNAdisease

Entry Detail

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General Information

Database ID: exR0766559 RNA Name: NUTM2A-AS1 RNA Type: lncRNA Chromosome: chr10 Starnd: - Coordinate: Start Site(bp): 87201647 End Site(bp): 87342612 External Links: ENSG00000223482

Disease Information

Disease Name: Lung Cancer Disease Category: Cancers MeSH ID: D008175 Type: Neoplasms/Respiratory Tract Neoplasms Alias: Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung

Expression Detail

GEO ID: GSE69732 Description: Circulating RNAs profile in non-small cell lung cancer patients Experimental Design: Cancer vs Control Case Disease Type: Lung Cancer Case Disease SubType: Non-Small Cell Lung Cancer Case Sample: Non-Small Cell Lung Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-148b-3p chr12 54337278 54337299 + hsa-let-7a-5p chr9 94175962 94175983 + hsa-miR-4428 chr1 237471164 237471185 + hsa-miR-4458 chr5 8460933 8460951 + hsa-miR-107 chr10 89592756 89592778 - hsa-miR-129-5p chr7 128207876 128207896 + hsa-let-7c-5p chr21 16539838 16539859 + hsa-miR-15a-5p chr13 50049167 50049188 - hsa-miR-376a-3p chr14 101040825 101040845 + hsa-miR-424-5p chrX 134546680 134546701 - hsa-miR-16-5p chr3 160404754 160404775 + hsa-miR-103a-3p chr5 168560904 168560926 - hsa-miR-139-5p chr11 72615102 72615124 - hsa-let-7d-5p chr9 94178841 94178862 + hsa-let-7b-5p chr22 46113691 46113712 + hsa-miR-488-3p chr1 177029374 177029394 - hsa-miR-148a-3p chr7 25949922 25949943 - hsa-let-7e-5p chr19 51692793 51692814 + hsa-miR-942-5p chr1 117094655 117094676 + hsa-let-7i-5p chr12 62603691 62603712 + hsa-miR-4524a-5p chr17 69099606 69099627 - hsa-miR-6884-5p chr17 40026383 40026404 - hsa-miR-4524b-5p chr17 69099570 69099590 + hsa-miR-548o-3p chr20 38516607 38516628 + hsa-miR-4500 chr13 87618671 87618687 - hsa-miR-409-5p chr14 101065314 101065336 + hsa-miR-485-5p chr14 101055427 101055448 + hsa-miR-6838-5p chr7 44073407 44073428 - hsa-miR-195-5p chr17 7017667 7017687 - hsa-miR-15b-5p chr3 160404607 160404628 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AL132656.3 chr10 79663192 79664786 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26417025 Title: Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison. Author: Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC. Journal: Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30. Description: Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.