Entry Detail



General Information

Database ID:exR0766658
RNA Name:TYMSOS
RNA Type:lncRNA
Chromosome:chr18
Starnd:-
Coordinate:
Start Site(bp):630886End Site(bp):658340
External Links:ENSG00000176912



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE69732
Description:Circulating RNAs profile in non-small cell lung cancer patients
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:Non-Small Cell Lung Cancer
Case Sample:Non-Small Cell Lung Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-23a-3p
chr19
13836595
13836615
-
hsa-miR-221-3p
chrX
45746180
45746202
-
hsa-miR-222-3p
chrX
45747036
45747056
-
hsa-miR-23b-3p
chr9
95085265
95085287
+
hsa-miR-130a-5p
chr11
57641212
57641233
+
hsa-miR-1321
chrX
85835832
85835849
+
hsa-miR-23c
chrX
20017101
20017122
-
hsa-miR-4739
chr17
79707216
79707240
-
hsa-miR-4756-5p
chr20
54068452
54068474
-
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:26417025
Title:Circulating Messenger RNA Profiling with Microarray and Next-generation Sequencing: Cross-platform Comparison.
Author:Shih CL, Luo JD, Chang JW, Chen TL, Chien YT, Yu CJ, Chiou CC.
Journal:Cancer Genomics Proteomics. 2015 Sep-Oct;12(5):223-30.
Description:Genes with higher expression levels have cross-platform concordance and can be potential biomarkers.