Entry Detail


General Information

Database ID:exR0783583
RNA Name:AC135050.1
RNA Type:lncRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):31056460End Site(bp):31062803
External Links:ENSG00000232748



Disease Information

Disease Name:Colorectal Cancer
Disease Category:Cancers
MeSH ID:D003110
Type:Neoplasms/Digestive System Neoplasms
Alias:Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon



Expression Detail

GEO ID:GSE83353
Description:Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle.
Experimental Design:Cancer vs Control
Case Disease Type:Colorectal Cancer
Case Disease SubType:NA
Case Sample:Colorectal Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ADPGK
chr15
72751369
72785846
-
BCKDK
chr16
31106107
31112791
+
CLPTM1L
chr5
1317752
1345099
-
DPYSL5
chr2
26847747
26950351
+
ELF3
chr1
202007945
202017183
+
PCSK1N
chrX
48831096
48835610
-
TMEM30A
chr6
75252924
75284948
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:27441409
Title:Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle.
Author:Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E.
Journal:PLoS One. 2016 Jul 21;11(7):e0159522.
Description:A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.