exRNAdisease

Entry Detail

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General Information

Database ID: exR0783609 RNA Name: ADAMTSL4-AS1 RNA Type: lncRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 150560202 End Site(bp): 150574552 External Links: ENSG00000203804

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC026464.4 chr16 69299682 69322700 + VPS4A chr16 69311350 69326939 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-214-3p chr1 172138816 172138837 - hsa-miR-217-5p chr2 55983020 55983042 - hsa-miR-218-5p chr5 168768211 168768231 - hsa-miR-134-5p chr14 101054694 101054715 + hsa-miR-190a-5p chr15 62823971 62823992 + hsa-miR-520g-3p chr19 53722220 53722243 + hsa-miR-520h chr19 53742566 53742587 + hsa-miR-371a-5p chr19 53787680 53787699 + hsa-miR-190b-5p chr1 154193712 154193733 - hsa-miR-761 chr1 51836375 51836396 - hsa-miR-3118 chr15 21843793 21843815 + hsa-miR-3127-5p chr2 96798288 96798310 + hsa-miR-3140-3p chr4 152489336 152489357 - hsa-miR-3164 chr11 69083185 69083206 + hsa-miR-3619-5p chr22 46091059 46091080 + hsa-miR-4761-5p chr22 19963755 19963775 + hsa-miR-6807-3p chr19 58550354 58550376 + hsa-miR-6820-3p chr22 37967603 37967624 + circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.