exRNAdisease

Entry Detail

---



General Information

Database ID: exR0783812 RNA Name: DLEU2 RNA Type: lncRNA Chromosome: chr13 Starnd: - Coordinate: Start Site(bp): 49956670 End Site(bp): 50125720 External Links: ENSG00000231607

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-30a-5p chr6 71403595 71403616 - hsa-miR-30c-5p chr6 71377003 71377025 - hsa-miR-30d-5p chr8 134804919 134804940 - hsa-miR-30b-5p chr8 134800570 134800591 - hsa-miR-186-5p chr1 71067681 71067702 - hsa-miR-30e-5p chr1 40754371 40754392 + hsa-miR-641 chr19 40282603 40282626 - hsa-miR-455-3p chr9 114209487 114209507 + hsa-miR-3163 chr11 66934476 66934497 - hsa-miR-3171 chr14 27633246 27633269 - hsa-miR-3617-5p chr20 45705150 45705171 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.