exRNAdisease

Entry Detail

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General Information

Database ID: exR0784085 RNA Name: MIR194-2HG RNA Type: lncRNA Chromosome: chr11 Starnd: - Coordinate: Start Site(bp): 64889560 End Site(bp): 64893449 External Links: ENSG00000229719

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-192-5p chr11 64891203 64891223 - hsa-miR-215-5p chr1 220117916 220117936 - hsa-miR-193a-3p chr17 31560050 31560071 + hsa-miR-328-3p chr16 67202327 67202348 - hsa-miR-193b-3p chr16 14304017 14304038 + hsa-miR-516b-5p chr19 53736860 53736881 + hsa-miR-760 chr1 93846880 93846899 + hsa-miR-3180-3p chr16 16309936 16309957 + hsa-miR-3196 chr20 63238788 63238805 + hsa-miR-3180 chr16 15154949 15154967 - hsa-miR-3173-5p chr14 95137961 95137982 - hsa-miR-3064-5p chr17 64500817 64500837 - hsa-miR-6504-5p chr16 81611352 81611372 + hsa-miR-6799-3p chr19 49791912 49791934 + hsa-miR-6816-5p chr22 20114726 20114746 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.