exRNAdisease

Entry Detail

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General Information

Database ID: exR0784093 RNA Name: MIR497HG RNA Type: lncRNA Chromosome: chr17 Starnd: - Coordinate: Start Site(bp): 7015818 End Site(bp): 7019659 External Links: ENSG00000267532

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-195-5p chr17 7017667 7017687 - hsa-miR-3187-3p chr19 813627 813646 + hsa-miR-642a-5p chr19 45674943 45674964 + hsa-miR-4525 chr17 82668281 82668301 - hsa-miR-1306-5p chr22 20086072 20086093 + hsa-miR-488-3p chr1 177029374 177029394 - hsa-miR-942-5p chr1 117094655 117094676 + hsa-miR-424-5p chrX 134546680 134546701 - hsa-miR-197-3p chr1 109598940 109598961 + hsa-miR-497-5p chr17 7017979 7017999 - hsa-miR-29c-3p chr1 207801865 207801886 - hsa-miR-128-3p chr2 135665446 135665466 + hsa-miR-371a-3p chr19 53787716 53787738 + hsa-miR-16-5p chr3 160404754 160404775 + hsa-miR-3180 chr16 15154949 15154967 - hsa-miR-29a-3p chr7 130876748 130876769 - hsa-miR-588 chr6 126484646 126484666 + hsa-miR-526b-5p chr19 53694406 53694428 + hsa-miR-512-3p chr19 53666729 53666750 + hsa-miR-513b-5p chrX 147199093 147199114 - hsa-miR-599 chr8 99536651 99536670 - hsa-miR-3681-3p chr2 12199174 12199195 + hsa-miR-4701-5p chr12 48772014 48772035 - hsa-miR-140-3p chr16 69933142 69933162 + hsa-miR-3180-3p chr16 16309936 16309957 + hsa-miR-642b-5p chr19 45674978 45674999 - hsa-miR-665 chr14 100875075 100875094 + hsa-miR-4731-5p chr17 15251666 15251687 - hsa-miR-3918 chr6 158764715 158764735 - hsa-miR-1266-3p chr15 52277131 52277152 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.