exRNAdisease

Entry Detail

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General Information

Database ID: exR0788842 RNA Name: EPN1 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 55675226 End Site(bp): 55709858 External Links: ENSG00000063245

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASDH chr4 56338287 56387508 - AC010422.3 chr19 12643831 12648397 - AC011448.1 chr19 19516227 19536076 + AC046185.1 chr17 63702845 63752097 - AC048338.1 chr12 122207779 122266423 - ACTN4 chr19 38647649 38731589 + ADGRA3 chr4 22345071 22516066 - ADGRG6 chr6 142301854 142446266 + ADNP chr20 50888916 50931437 - AGRN chr1 1020120 1056118 + AHCY chr20 34280268 34311802 - AHNAK chr11 62433542 62556235 - AIMP2 chr7 6009255 6023834 + AJM1 chr9 136844415 136848801 + AKAP13 chr15 85380571 85749358 + AKT2 chr19 40230317 40285536 - AL162417.1 chr9 133098121 133163914 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.