exRNAdisease

Entry Detail

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General Information

Database ID: exR0790134 RNA Name: GOLPH3 RNA Type: mRNA Chromosome: chr5 Starnd: - Coordinate: Start Site(bp): 32124716 End Site(bp): 32174319 External Links: ENSG00000113384

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAGAB chr15 67200667 67255195 - AASDH chr4 56338287 56387508 - ABHD17A chr19 1876810 1885547 - AC005258.1 chr19 2269525 2341172 + AC010323.1 chr19 8308283 8321379 - AC040162.1 chr16 67929614 67936017 - AC139530.2 chr17 81703371 81720539 + ACIN1 chr14 23058564 23095614 - ACTB chr7 5527148 5563784 - ACVR1B chr12 51951699 51997078 + AD000671.1 chr19 35745678 35754519 + ADAM11 chr17 44758988 44781846 + ADGRB1 chr8 142449430 142545009 + AKAP8 chr19 15353385 15379798 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC103702.1 chr17 48579630 48582259 - AC113189.4 chr17 7439506 7445966 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.