exRNAdisease

Entry Detail

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General Information

Database ID: exR0790330 RNA Name: GRK2 RNA Type: mRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 67266473 End Site(bp): 67286556 External Links: ENSG00000173020

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCB6 chr2 219209772 219218994 - ABI3 chr17 49210411 49223225 + AC005258.1 chr19 2269525 2341172 + AC007040.2 chr2 70939318 70995336 - AC007192.1 chr19 18153158 18178117 + AC010422.3 chr19 12643831 12648397 - AC068946.2 chr2 219209772 219222738 - AC093525.1 chr16 2513965 2527955 + AC138811.2 chr16 18788063 18801519 - AC245033.1 chr15 82536788 82573194 - ACAD10 chr12 111686056 111757107 + ACTB chr7 5527148 5563784 - ADAR chr1 154582057 154628013 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-31-5p chr9 21512158 21512178 - hsa-miR-218-5p chr5 168768211 168768231 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC022167.2 chr16 8848105 8860456 + AC069281.2 chr7 100572232 100578700 - AD000090.1 chr19 35557956 35581954 + AL136419.1 chr14 23969931 24051377 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.