exRNAdisease

Entry Detail

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General Information

Database ID: exR0790704 RNA Name: HNRNPC RNA Type: mRNA Chromosome: chr14 Starnd: - Coordinate: Start Site(bp): 21209136 End Site(bp): 21269494 External Links: ENSG00000092199

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASS chr7 122073549 122144255 - ABHD4 chr14 22598237 22613215 + ABLIM1 chr10 114431113 114768061 - AC006064.6 chr12 6556886 6607367 - AC006486.1 chr19 42234583 42255132 - AC007192.1 chr19 18153158 18178117 + AC011462.1 chr19 41350853 41425001 + AC024592.3 chr19 5866171 5903787 - AC026464.4 chr16 69299682 69322700 + AC058822.1 chr4 53377839 54295272 + AC092073.1 chr19 34396315 34409364 + AC245033.1 chr15 82536788 82573194 - ACAP2 chr3 195274745 195443044 - ACIN1 chr14 23058564 23095614 - ACTN1 chr14 68874143 68979440 - ACTR6 chr12 100199122 100241865 + ADGRV1 chr5 90529344 91164437 + ADH5 chr4 99070978 99088801 - AFDN chr6 167826922 167972023 + AGGF1 chr5 77029251 77065234 + AJUBA chr14 22971177 22982551 - AKIRIN2 chr6 87674860 87702233 - AL360181.3 chr10 133380017 133420271 + ALDH18A1 chr10 95605941 95656711 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006538.1 chr19 2727743 2729327 - AC007952.4 chr17 19112000 19112636 - AC008438.1 chr5 140370891 140401460 - AC018521.1 chr17 47945424 47981736 + AC023509.1 chr12 53441741 53467528 + AC023908.2 chr15 39770559 39801333 - AC106864.1 chr4 112693047 112706810 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.