exRNAdisease

Entry Detail

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General Information

Database ID: exR0790934 RNA Name: ID1 RNA Type: mRNA Chromosome: chr20 Starnd: + Coordinate: Start Site(bp): 31605283 End Site(bp): 31606515 External Links: ENSG00000125968

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008581.2 chr5 77030902 77152155 + AC008878.3 chr19 7382834 7470241 + AC010422.3 chr19 12643831 12648397 - AC040162.1 chr16 67929614 67936017 - ACADVL chr17 7217125 7225266 + ACBD6 chr1 180269653 180502954 - ACTN4 chr19 38647649 38731589 + ACTR1B chr2 97655939 97664044 - AEBP2 chr12 19404045 19720801 + AGAP3 chr7 151085831 151144436 + AGFG1 chr2 227472152 227561214 + AGGF1 chr5 77029251 77065234 + AGO4 chr1 35808016 35857890 + AGPAT5 chr8 6708642 6761503 + AKR7A2 chr1 19303965 19312146 - AKT1S1 chr19 49869033 49878459 - AKT3 chr1 243488233 243851079 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC132217.1 chr11 2129121 2129964 - AL137782.1 chr13 75549773 75807120 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.