exRNAdisease

Entry Detail

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General Information

Database ID: exR0791968 RNA Name: LAPTM5 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 30732469 End Site(bp): 30757774 External Links: ENSG00000162511

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD2 chr15 89087459 89202355 + AC004922.1 chr7 99325879 99394653 + AC007192.1 chr19 18153158 18178117 + AC009690.3 chr15 72266746 72319946 - AC010422.3 chr19 12643831 12648397 - AC015813.2 chr17 57989038 58007246 - AC069503.2 chr12 121888809 121921470 + AC104452.1 chr3 49416777 49429314 - AC104472.3 chr3 155763043 155854442 - AC118549.1 chr1 77562416 77683419 - ACAT2 chr6 159762045 159779112 + ACO1 chr9 32384603 32454769 + ACTA1 chr1 229431245 229434098 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - AGPAT1 chr6 32168212 32178096 - AHCY chr20 34280268 34311802 - AKR1A1 chr1 45550543 45570049 + AKT2 chr19 40230317 40285536 - AL121594.1 chr14 35122549 35317474 + AL136454.1 chr1 192716132 192716653 + AL358113.1 chr9 69035747 69255187 + AL645941.2 chr6 32937364 32953122 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010226.1 chr5 115602057 115623897 + AC016876.2 chr17 7581964 7584086 - AC040162.3 chr16 67882461 67886367 + AC051619.7 chr15 45200325 45200632 - AC245014.3 chr1 145281116 145281462 + AC245884.11 chr19 54308915 54337168 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.