exRNAdisease

Entry Detail

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General Information

Database ID: exR0792448 RNA Name: MACF1 RNA Type: mRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 39081316 End Site(bp): 39487177 External Links: ENSG00000127603

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AADAT chr4 170060222 170091699 - ABCB7 chrX 75051048 75156732 - ABCC1 chr16 15949577 16143074 + ABHD2 chr15 89087459 89202355 + AC124312.1 chr15 24955034 25000276 + ACLY chr17 41866917 41930542 - ADAR chr1 154582057 154628013 - ADCK5 chr8 144373101 144393242 + ADCY6 chr12 48766194 48789037 - ADPGK chr15 72751369 72785846 - ADSL chr22 40346500 40390463 + AL022238.4 chr22 40346529 40410054 + AL139011.2 chr1 160216800 160285130 - AL603832.3 chr1 112702614 112711433 - ALDH18A1 chr10 95605941 95656711 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-624-5p chr14 31014706 31014727 - hsa-miR-5100 chr10 42997630 42997651 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC084082.1 chr8 66112667 66126632 + AD000090.1 chr19 35557956 35581954 + AL049543.1 chr6 28587378 28591747 + AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.