exRNAdisease

Entry Detail

---



General Information

Database ID: exR0792684 RNA Name: MCM3AP RNA Type: mRNA Chromosome: chr21 Starnd: - Coordinate: Start Site(bp): 46235133 End Site(bp): 46286297 External Links: ENSG00000160294

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAR2 chr20 36236459 36270918 + AC003002.2 chr19 57394183 57438457 + AC003002.3 chr19 57389884 57419994 + AC010323.1 chr19 8308283 8321379 - AC023055.1 chr12 55757275 55827546 - AC091167.2 chr15 90249556 90272208 + ACAP3 chr1 1292390 1309609 - ACTG1 chr17 81509971 81523847 - ACTG2 chr2 73892314 73919865 + ADAR chr1 154582057 154628013 - ADNP chr20 50888916 50931437 - AIF1L chr9 131096476 131123152 + AKT1S1 chr19 49869033 49878459 - AL358113.1 chr9 69035747 69255187 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008870.2 chr16 23670011 23675499 + AC040162.3 chr16 67882461 67886367 + AC132217.1 chr11 2129121 2129964 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.