exRNAdisease

Entry Detail

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General Information

Database ID: exR0793204 RNA Name: MT-ND3 RNA Type: mRNA Chromosome: chrMT Starnd: + Coordinate: Start Site(bp): 10059 End Site(bp): 10404 External Links: ENSG00000198840

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC1 chr16 15949577 16143074 + AC005832.4 chr12 4604944 4662643 + AC008758.5 chr19 12391949 12441082 - AC012254.2 chr18 47108188 47176345 - AC018523.2 chr11 14493783 14520344 - AC073508.2 chr17 40627356 40665141 - AC092143.1 chr16 89919165 89936092 + AC093155.3 chr1 86993009 87169204 + AC245033.1 chr15 82536788 82573194 - ACAA2 chr18 49782164 49813953 - ACAP2 chr3 195274745 195443044 - ACTR1A chr10 102461881 102502712 - ACTR2 chr2 65227753 65271253 + ADNP chr20 50888916 50931437 - ADPRHL2 chr1 36088892 36093932 + ADRM1 chr20 62302093 62308862 + AHCY chr20 34280268 34311802 - AHCYL1 chr1 109984765 110023742 + AIF1L chr9 131096476 131123152 + AIMP1 chr4 106315544 106349456 + AK2 chr1 33007940 33080996 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016747.4 chr2 61115787 61164825 + AC016876.2 chr17 7581964 7584086 - AC022819.1 chr15 99157231 99161140 - AC245014.3 chr1 145281116 145281462 + AC245033.4 chr15 82533175 82540008 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.