exRNAdisease

Entry Detail

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General Information

Database ID: exR0793459 RNA Name: NASP RNA Type: mRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 45583846 End Site(bp): 45618904 External Links: ENSG00000132780

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AASS chr7 122073549 122144255 - ABCD1 chrX 153724856 153744755 + AC004922.1 chr7 99325879 99394653 + AC004997.1 chr22 30285238 30299482 - AC010422.3 chr19 12643831 12648397 - AC011455.2 chr19 38915404 38949855 - AC011462.1 chr19 41350853 41425001 + AC027644.4 chr7 66628958 66811189 + ACLY chr17 41866917 41930542 - ACTG1 chr17 81509971 81523847 - ADAR chr1 154582057 154628013 - ADGRA1 chr10 133070929 133131675 + AGFG1 chr2 227472152 227561214 + AHNAK chr11 62433542 62556235 - AKIRIN1 chr1 38991276 39006059 + AL133352.1 chr10 100505628 100529881 - AL365205.1 chr6 41780349 41790141 + ALDH4A1 chr1 18871430 18902724 - ALDH7A1 chr5 126531200 126595362 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-29a-3p chr7 130876748 130876769 - hsa-miR-29b-3p chr7 130877467 130877489 - hsa-miR-29c-3p chr1 207801865 207801886 - hsa-miR-492 chr12 94834427 94834449 + hsa-miR-5703 chr2 227472162 227472179 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC132217.1 chr11 2129121 2129964 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.