exRNAdisease

Entry Detail

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General Information

Database ID: exR0793839 RNA Name: NOP53 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 47745546 End Site(bp): 47757058 External Links: ENSG00000105373

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC1 chr16 15949577 16143074 + ABHD3 chr18 21650901 21704780 - ABL1 chr9 130713016 130887675 + AC010422.3 chr19 12643831 12648397 - AC011455.2 chr19 38915404 38949855 - AC118553.2 chr1 99970011 100083321 + AC124312.1 chr15 24955034 25000276 + ACACA chr17 37084992 37406836 - ACADSB chr10 123008979 123058290 + ACIN1 chr14 23058564 23095614 - ACOT8 chr20 45841721 45857405 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ACTR3 chr2 113890063 113962596 + ACVR2B chr3 38453890 38493142 + ADAM11 chr17 44758988 44781846 + ADNP chr20 50888916 50931437 - AGPAT1 chr6 32168212 32178096 - AHCYL1 chr1 109984765 110023742 + AHR chr7 16916359 17346152 + AIP chr11 67483026 67491103 + AL121594.1 chr14 35122549 35317474 + AL136531.2 chr20 1317571 1393096 - AL355987.1 chr9 136738167 136748453 - AL928654.3 chr14 105487199 105492267 + ALDH6A1 chr14 74056847 74084492 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016876.2 chr17 7581964 7584086 - AC021078.1 chr5 149494314 149504670 - AD000090.1 chr19 35557956 35581954 + AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.