exRNAdisease

Entry Detail

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General Information

Database ID: exR0794694 RNA Name: PAICS RNA Type: mRNA Chromosome: chr4 Starnd: + Coordinate: Start Site(bp): 56435741 End Site(bp): 56464579 External Links: ENSG00000128050

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AAK1 chr2 69457997 69674349 - AAR2 chr20 36236459 36270918 + ABHD18 chr4 127965306 128039927 + AC120057.2 chr17 7240427 7244635 - AC135050.2 chr16 31083439 31094956 - AC245033.1 chr15 82536788 82573194 - ACOT7 chr1 6264269 6394391 - ACSS1 chr20 25006230 25058980 - ACTR8 chr3 53867066 53882152 - ADA2 chr22 17178790 17258235 - ADD1 chr4 2843857 2930076 + ADI1 chr2 3497366 3519531 - AEN chr15 88621337 88632281 + AGO3 chr1 35930718 36072500 + AGPAT3 chr21 43865223 43987592 + AHCYL1 chr1 109984765 110023742 + AIMP2 chr7 6009255 6023834 + AK2 chr1 33007940 33080996 - ALDH9A1 chr1 165662216 165698863 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005726.3 chr17 28573117 28574243 + AC016044.1 chr15 52800168 52805972 - AC020917.2 chr19 16440946 16443584 + AC022140.1 chr5 25404733 25445925 - AC093827.4 chr4 86924630 86936202 - AC105383.1 chr4 133075311 133149147 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.