exRNAdisease

Entry Detail

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General Information

Database ID: exR0795722 RNA Name: PRDX2 RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 12796820 End Site(bp): 12801800 External Links: ENSG00000167815

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010422.3 chr19 12643831 12648397 - AC012184.2 chr16 70299194 70372582 + AC020909.1 chr19 50415799 50428409 + ACACA chr17 37084992 37406836 - ACADM chr1 75724347 75787575 + ACIN1 chr14 23058564 23095614 - ACO2 chr22 41469117 41528989 + ACTG1 chr17 81509971 81523847 - AHCY chr20 34280268 34311802 - AHCYL2 chr7 129225023 129430211 + AL713999.1 chr1 155169409 155187272 - ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-409-5p chr14 101065314 101065336 + hsa-miR-625-5p chr14 65471116 65471136 + hsa-miR-147b-3p chr15 45433098 45433118 + hsa-miR-639 chr19 14529603 14529625 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016876.2 chr17 7581964 7584086 - AC074212.1 chr19 45764785 45769806 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.