exRNAdisease

Entry Detail

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General Information

Database ID: exR0795726 RNA Name: PRDX6 RNA Type: mRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 173477330 End Site(bp): 173488815 External Links: ENSG00000117592

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC002985.1 chr19 18907013 18934397 - AC011511.4 chr19 10315471 10320678 - AC046185.1 chr17 63702845 63752097 - AC092143.1 chr16 89919165 89936092 + AC138969.1 chr16 16317444 16350590 + AC139530.2 chr17 81703371 81720539 + ACAA2 chr18 49782164 49813953 - ACBD6 chr1 180269653 180502954 - AFF1 chr4 86935002 87141054 + AKIRIN1 chr1 38991276 39006059 + AKT3 chr1 243488233 243851079 - AL136295.5 chr14 24147548 24166452 + AL365205.1 chr6 41780349 41790141 + ALDH9A1 chr1 165662216 165698863 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006141.1 chr17 51249579 51251748 - AC007406.5 chr12 273954 277123 - AC051619.7 chr15 45200325 45200632 - AC126365.1 chr17 20788071 20789584 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.