Entry Detail


General Information

Database ID:exR0795907
RNA Name:PSAP
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):71816298End Site(bp):71851325
External Links:ENSG00000197746



Disease Information

Disease Name:Colorectal Cancer
Disease Category:Cancers
MeSH ID:D003110
Type:Neoplasms/Digestive System Neoplasms
Alias:Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon



Expression Detail

GEO ID:GSE83353
Description:Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle.
Experimental Design:Cancer vs Control
Case Disease Type:Colorectal Cancer
Case Disease SubType:NA
Case Sample:Colorectal Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD4
chr14
22598237
22613215
+
AC008764.1
chr19
16479067
16628204
-
AC015813.2
chr17
57989038
58007246
-
AC138811.2
chr16
18788063
18801519
-
AC245033.1
chr15
82536788
82573194
-
ACAA1
chr3
38103129
38137242
-
ACD
chr16
67657512
67660815
-
ACKR3
chr2
236567787
236582354
+
ACOX1
chr17
75941507
75979177
-
ACTB
chr7
5527148
5563784
-
ACTN4
chr19
38647649
38731589
+
ADH5
chr4
99070978
99088801
-
ADI1
chr2
3497366
3519531
-
AGPAT5
chr8
6708642
6761503
+
AHSA1
chr14
77457870
77469472
+
AKT2
chr19
40230317
40285536
-
AL022238.4
chr22
40346529
40410054
+
AL136295.5
chr14
24147548
24166452
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004943.2
chr16
72665123
72822781
+
AC026362.1
chr12
122975320
122982907
+
AC067930.1
chr8
143579636
143580670
+
AC079781.5
chr7
97851688
97972985
-
AC103746.1
chr15
96342953
96345651
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:27441409
Title:Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle.
Author:Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E.
Journal:PLoS One. 2016 Jul 21;11(7):e0159522.
Description:A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.