exRNAdisease

Entry Detail

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General Information

Database ID: exR0796795 RNA Name: RPL14 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 40457292 End Site(bp): 40468587 External Links: ENSG00000188846

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCA1 chr9 104781006 104928155 - ABCB6 chr2 219209772 219218994 - AC010422.3 chr19 12643831 12648397 - AC068946.2 chr2 219209772 219222738 - AC105052.1 chr7 102582523 102642869 - AC105052.3 chr7 102637049 102671641 - AC126283.2 chr4 109713916 109801999 - AC245033.1 chr15 82536788 82573194 - ACAD9 chr3 128879596 128916067 + ACKR3 chr2 236567787 236582354 + ACLY chr17 41866917 41930542 - ACO2 chr22 41469117 41528989 + ACPP chr3 132317369 132368298 + ACSS1 chr20 25006230 25058980 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - ACTR1B chr2 97655939 97664044 - ACTR3 chr2 113890063 113962596 + ADAM33 chr20 3667965 3682246 - ADPGK chr15 72751369 72785846 - ADRM1 chr20 62302093 62308862 + AGO4 chr1 35808016 35857890 + AGPAT5 chr8 6708642 6761503 + AIF1L chr9 131096476 131123152 + AK4 chr1 65147549 65232145 + AL049629.2 chr11 33698261 33722467 - AL136454.1 chr1 192716132 192716653 + AL355987.3 chr9 136791379 136800595 + ALDH18A1 chr10 95605941 95656711 - ALDH1L2 chr12 105019784 105107643 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004943.2 chr16 72665123 72822781 + AC005540.1 chr2 190880797 190882059 - AC011468.5 chr19 52049007 52049754 + AC105383.1 chr4 133075311 133149147 - AC108010.1 chr7 128574751 128626473 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.