exRNAdisease

Entry Detail

---



General Information

Database ID: exR0796801 RNA Name: RPL19 RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 39200283 End Site(bp): 39204732 External Links: ENSG00000108298

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand A1BG chr19 58345178 58353492 - ABCA1 chr9 104781006 104928155 - ABCC4 chr13 95019835 95301475 - ABI2 chr2 203328239 203447728 + AC018523.2 chr11 14493783 14520344 - AC073508.2 chr17 40627356 40665141 - AC084337.2 chr11 6481485 6508978 + AC134669.1 chr17 31305213 31318831 - AC245033.1 chr15 82536788 82573194 - ACACA chr17 37084992 37406836 - ACLY chr17 41866917 41930542 - ACTG1 chr17 81509971 81523847 - ADAM10 chr15 58588809 58749791 - ADGRG6 chr6 142301854 142446266 + AGO2 chr8 140520156 140635633 - AHCY chr20 34280268 34311802 - AIMP2 chr7 6009255 6023834 + AL121753.1 chr20 35267885 35280043 - AL121758.1 chr20 646626 675800 - AL138752.2 chr9 37588413 38068687 - AL513165.2 chr9 37512547 37592469 - ALDH18A1 chr10 95605941 95656711 - ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006213.1 chr19 43996896 44003298 - AC012313.3 chr19 58346854 58362751 - AC023509.1 chr12 53441741 53467528 + AC113189.2 chr17 7420103 7444081 + AC113189.4 chr17 7439506 7445966 + AC245033.4 chr15 82533175 82540008 - AL022311.1 chr22 37876148 37895563 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.