exRNAdisease

Entry Detail

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General Information

Database ID: exR0796803 RNA Name: RPL22 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 6185020 End Site(bp): 6209389 External Links: ENSG00000116251

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABTB2 chr11 34150987 34358010 - AC007192.1 chr19 18153158 18178117 + AC011462.1 chr19 41350853 41425001 + AC015813.2 chr17 57989038 58007246 - AC067968.1 chr19 44025354 44087318 + AC092073.1 chr19 34396315 34409364 + ACAT1 chr11 108116695 108147603 + ACTG1 chr17 81509971 81523847 - ACTR2 chr2 65227753 65271253 + ADAR chr1 154582057 154628013 - ADIPOR1 chr1 202940826 202958572 - AGO1 chr1 35869808 35930532 + AHCY chr20 34280268 34311802 - AHCYL1 chr1 109984765 110023742 + AHCYL2 chr7 129225023 129430211 + AICDA chr12 8602170 8612867 - AK4 chr1 65147549 65232145 + AKAP1 chr17 57085092 57121346 + AKAP11 chr13 42272152 42323261 + AKAP13 chr15 85380571 85749358 + AL049779.1 chr14 67659820 67690367 - AL136454.1 chr1 192716132 192716653 + AL139300.1 chr14 103562962 103685924 + AL365205.1 chr6 41780349 41790141 + ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC132217.1 chr11 2129121 2129964 - AD000090.1 chr19 35557956 35581954 + AL031847.1 chr1 6204840 6205780 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.