exRNAdisease

Entry Detail

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General Information

Database ID: exR0796808 RNA Name: RPL26 RNA Type: mRNA Chromosome: chr17 Starnd: - Coordinate: Start Site(bp): 8377516 End Site(bp): 8383213 External Links: ENSG00000161970

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABR chr17 1003518 1229738 - AC006030.1 chr2 74211604 74363377 - AC120057.2 chr17 7240427 7244635 - AC244197.3 chrX 149477104 149540926 - AC245033.1 chr15 82536788 82573194 - ACTC1 chr15 34790230 34795549 - ACTG1 chr17 81509971 81523847 - ACTN4 chr19 38647649 38731589 + ACVR1B chr12 51951699 51997078 + ACVR2B chr3 38453890 38493142 + ADAR chr1 154582057 154628013 - ADNP2 chr18 80109262 80147523 + AIMP1 chr4 106315544 106349456 + AKR1B1 chr7 134442356 134459284 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC018521.1 chr17 47945424 47981736 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.