exRNAdisease

Entry Detail

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General Information

Database ID: exR0796815 RNA Name: RPL30 RNA Type: mRNA Chromosome: chr8 Starnd: - Coordinate: Start Site(bp): 98024851 End Site(bp): 98046469 External Links: ENSG00000156482

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004922.1 chr7 99325879 99394653 + AC010422.3 chr19 12643831 12648397 - AC069503.2 chr12 121888809 121921470 + AC073508.2 chr17 40627356 40665141 - AC090517.4 chr15 56652488 56918571 - AC120057.2 chr17 7240427 7244635 - AC245033.1 chr15 82536788 82573194 - ACADM chr1 75724347 75787575 + ACAT2 chr6 159762045 159779112 + ACSL3 chr2 222860942 222944639 + ACTB chr7 5527148 5563784 - ACTR1A chr10 102461881 102502712 - ADSL chr22 40346500 40390463 + AGTRAP chr1 11736084 11754802 + AHCY chr20 34280268 34311802 - AICDA chr12 8602170 8612867 - AL022238.4 chr22 40346529 40410054 + AL136295.5 chr14 24147548 24166452 + AL138752.2 chr9 37588413 38068687 - AL513165.2 chr9 37512547 37592469 - AL713999.1 chr1 155169409 155187272 - ALDH18A1 chr10 95605941 95656711 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC027097.1 chr18 57630302 57669296 + AC027097.2 chr18 57639455 57738603 + AC105339.2 chr15 82752884 82757208 + AC245033.4 chr15 82533175 82540008 - AL132780.1 chr14 22929607 22956374 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.