exRNAdisease

Entry Detail

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General Information

Database ID: exR0796817 RNA Name: RPL32 RNA Type: mRNA Chromosome: chr3 Starnd: - Coordinate: Start Site(bp): 12834485 End Site(bp): 12841582 External Links: ENSG00000144713

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCB10 chr1 229516582 229558707 - ABHD4 chr14 22598237 22613215 + AC004805.1 chr17 65538102 65641033 - AC010132.3 chr7 42909273 42932174 - AC023055.1 chr12 55757275 55827546 - AC073896.1 chr12 56285916 56316059 - AC104109.3 chr5 134167170 134226071 - ACO2 chr22 41469117 41528989 + ACTB chr7 5527148 5563784 - ACTR2 chr2 65227753 65271253 + ADAM10 chr15 58588809 58749791 - ADD3 chr10 109996368 110135565 + ADNP chr20 50888916 50931437 - AFTPH chr2 64524305 64593005 + AGO1 chr1 35869808 35930532 + AHCY chr20 34280268 34311802 - AK3 chr9 4709556 4742043 - AL645941.2 chr6 32937364 32953122 - ALCAM chr3 105366909 105576900 + ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007218.1 chr16 9666885 9676843 - AC019294.2 chr15 75737820 75763322 + AC021078.1 chr5 149494314 149504670 - AC026362.1 chr12 122975320 122982907 + AC087190.3 chr16 9104848 9113181 + AC087280.2 chr11 6821942 6926878 - AC117386.2 chr3 150039214 150213726 + AC124068.2 chr15 89335053 89336161 + AC245014.3 chr1 145281116 145281462 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.