exRNAdisease

Entry Detail

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General Information

Database ID: exR0796841 RNA Name: RPLP2 RNA Type: mRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 809965 End Site(bp): 812880 External Links: ENSG00000177600

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010646.1 chr19 17235940 17255448 - ALDOA chr16 30064164 30070457 + AL139300.1 chr14 103562962 103685924 + AC011455.2 chr19 38915404 38949855 - AGO4 chr1 35808016 35857890 + AKAP1 chr17 57085092 57121346 + AC007192.1 chr19 18153158 18178117 + AC135050.2 chr16 31083439 31094956 - ADGRL2 chr1 81306160 81992436 + AC010422.3 chr19 12643831 12648397 - AC020915.5 chr19 58228914 58315183 + AKT2 chr19 40230317 40285536 - AFTPH chr2 64524305 64593005 + ACIN1 chr14 23058564 23095614 - AIFM1 chrX 130129362 130165887 - AC004922.1 chr7 99325879 99394653 + AL049629.2 chr11 33698261 33722467 - ADCY1 chr7 45574140 45723116 + ACTG1 chr17 81509971 81523847 - AFDN chr6 167826922 167972023 + AC005258.1 chr19 2269525 2341172 + ADRM1 chr20 62302093 62308862 + AL121594.1 chr14 35122549 35317474 + ALDH18A1 chr10 95605941 95656711 - AGRN chr1 1020120 1056118 + ADH5 chr4 99070978 99088801 - AACS chr12 125065434 125143333 + AGBL5 chr2 27042364 27070622 + ABCF1 chr6 30571393 30597179 + AC008878.3 chr19 7382834 7470241 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-7705 chr8 100703002 100703024 - circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007780.1 chr17 68413623 68524949 + AC017104.1 chr2 231388976 231394991 + AC018521.1 chr17 47945424 47981736 + AC026362.1 chr12 122975320 122982907 + AD000090.1 chr19 35557956 35581954 + AL137782.1 chr13 75549773 75807120 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.