exRNAdisease

Entry Detail

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General Information

Database ID: exR0796999 RNA Name: RUVBL2 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 48993562 End Site(bp): 49015970 External Links: ENSG00000183207

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005258.1 chr19 2269525 2341172 + ACLY chr17 41866917 41930542 - ACTB chr7 5527148 5563784 - ACVR2B chr3 38453890 38493142 + ADIPOR2 chr12 1688574 1788674 + AEBP1 chr7 44104345 44114562 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-6798-3p chr19 49009952 49009972 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC008124.1 chr12 45718046 45727775 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.