exRNAdisease

Entry Detail

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General Information

Database ID: exR0797297 RNA Name: SERBP1 RNA Type: mRNA Chromosome: chr1 Starnd: - Coordinate: Start Site(bp): 67407810 End Site(bp): 67430415 External Links: ENSG00000142864

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCB7 chrX 75051048 75156732 - ABLIM1 chr10 114431113 114768061 - AC007192.1 chr19 18153158 18178117 + AC008763.3 chr19 7678501 7682854 + AC010422.3 chr19 12643831 12648397 - AC011511.4 chr19 10315471 10320678 - AC093525.2 chr16 2496032 2520218 + AC112229.3 chr2 110402934 110473075 - AC135050.2 chr16 31083439 31094956 - AC245033.1 chr15 82536788 82573194 - ACAD8 chr11 134253495 134265855 + ACTA1 chr1 229431245 229434098 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - AD000671.2 chr19 35739252 35745432 - ADAR chr1 154582057 154628013 - ADCY6 chr12 48766194 48789037 - ADD3 chr10 109996368 110135565 + ADSL chr22 40346500 40390463 + AGBL5 chr2 27042364 27070622 + AHCYL1 chr1 109984765 110023742 + AKAP1 chr17 57085092 57121346 + AKR7A3 chr1 19282573 19288770 - AL022238.4 chr22 40346529 40410054 + AL109827.1 chr20 35632340 35674544 - AL136295.5 chr14 24147548 24166452 + ALDOA chr16 30064164 30070457 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-526b-5p chr19 53694406 53694428 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC010327.5 chr19 55216660 55221616 + AC022148.1 chr19 37545470 37549171 - AC023509.1 chr12 53441741 53467528 + AC245014.3 chr1 145281116 145281462 + AC245033.4 chr15 82533175 82540008 - AD000090.1 chr19 35557956 35581954 + AL133520.1 chr20 46681676 46682375 - AL137026.2 chr10 44259602 44261813 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.