exRNAdisease

Entry Detail

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General Information

Database ID: exR0798082 RNA Name: SNURF RNA Type: mRNA Chromosome: chr15 Starnd: + Coordinate: Start Site(bp): 24954986 End Site(bp): 24977850 External Links: ENSG00000273173

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCC4 chr13 95019835 95301475 - ABRACL chr6 139028745 139043302 + AC006064.6 chr12 6556886 6607367 - AC068946.2 chr2 219209772 219222738 - AC124312.1 chr15 24955034 25000276 + AC137834.1 chr12 57249609 57296484 - ACTB chr7 5527148 5563784 - ACTN4 chr19 38647649 38731589 + ACTR1A chr10 102461881 102502712 - ACTR1B chr2 97655939 97664044 - ACVR1B chr12 51951699 51997078 + AKAP17A chrX 1591604 1602520 + ALDH1B1 chr9 38392702 38398661 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC012467.2 chr3 53858994 53861576 - AC067852.2 chr17 42552436 42554748 - AC092490.1 chr12 8788253 8795789 + AC106864.1 chr4 112693047 112706810 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.