Entry Detail



General Information

Database ID:exR0798577
RNA Name:STX3
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):59713456End Site(bp):59805882
External Links:ENSG00000166900



Disease Information

Disease Name:Colorectal Cancer
Disease Category:Cancers
MeSH ID:D003110
Type:Neoplasms/Digestive System Neoplasms
Alias:Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon



Expression Detail

GEO ID:GSE83353
Description:Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle.
Experimental Design:Cancer vs Control
Case Disease Type:Colorectal Cancer
Case Disease SubType:NA
Case Sample:Colorectal Cancer
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-138-5p
chr16
56858527
56858549
+
hsa-miR-326
chr11
75335108
75335127
-
hsa-miR-650
chr22
22822791
22822811
+
hsa-miR-654-5p
chr14
101040234
101040255
+
hsa-miR-330-5p
chr19
45639049
45639070
-
hsa-miR-665
chr14
100875075
100875094
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC138207.2
chr17
31090787
31095450
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:27441409
Title:Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle.
Author:Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E.
Journal:PLoS One. 2016 Jul 21;11(7):e0159522.
Description:A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.