exRNAdisease

Entry Detail

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General Information

Database ID: exR0799142 RNA Name: TICRR RNA Type: mRNA Chromosome: chr15 Starnd: + Coordinate: Start Site(bp): 89575469 End Site(bp): 89631056 External Links: ENSG00000140534

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AACS chr12 125065434 125143333 + ABHD17A chr19 1876810 1885547 - ABHD6 chr3 58237532 58295693 + AC091959.3 chr5 146203550 146339251 + AC138969.1 chr16 16317444 16350590 + ADAMTS17 chr15 99971437 100342005 - ADGRB2 chr1 31727117 31764893 - AL121758.1 chr20 646626 675800 - AL121845.2 chr20 63738270 63740398 + AL121845.3 chr20 63708864 63739103 + AL157392.5 chr10 13610047 13655929 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005229.4 chr7 148696467 148698664 - AC067930.1 chr8 143579636 143580670 + AC125611.4 chr12 49292631 49324576 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.