exRNAdisease

Entry Detail

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General Information

Database ID: exR0799653 RNA Name: TPD52L2 RNA Type: mRNA Chromosome: chr20 Starnd: + Coordinate: Start Site(bp): 63865228 End Site(bp): 63891545 External Links: ENSG00000101150

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010463.1 chr19 17267418 17282966 + AC010522.1 chr19 57819719 57858941 + AC078927.1 chr12 66123917 66169985 - AC087289.3 chr17 75898645 75930129 - AC104109.3 chr5 134167170 134226071 - AD000671.1 chr19 35745678 35754519 + ADCK1 chr14 77800109 77935014 + ADH5 chr4 99070978 99088801 - AGPAT3 chr21 43865223 43987592 + AJM1 chr9 136844415 136848801 + AK2 chr1 33007940 33080996 - AL109827.1 chr20 35632340 35674544 - AL133352.1 chr10 100505628 100529881 - AL358113.1 chr9 69035747 69255187 + ALDOA chr16 30064164 30070457 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.